The MorphoCut image processing pipeline library¶
MorphoCut is a pipelined image processing library designed to handle large volumes of biological, medical, oceanographic and remote sensing image data. It is modular from ground up and comes with “batteries included” to provide common processing steps like segmentation and feature extraction. It reads and writes many formats like video, Bio-Formats and EcoTaxa.
User Guide¶
- Introduction
- Why not just library XY?
- Installation
- Image processing
- String operations
- Filesystem operations
- Stream manipulation
- Batch operations
- Signal Processing Filters
- Image Statistics
- Scalebar
- Parallel processing
- Other formats
- Profiling
- Core API
- Contributed Nodes
- PyTorch
- Integration
- MJPEGStreamer
- Utilities
- Examples
- Contributing
- Authors
Acknowledgements¶
This project was made possible by the support from SFB754 - Climate Biogeochemistry Interactions in the Tropical Ocean.